
This tutorial walks through the process of setting up a forward model and simulating a lead field matrix using the MNE-Python library, a foundational step for source estimation tasks in CaliBrain.
A selected collection of tutorials I have created for data analysis, machine learning, and data visualisation.
CaliBrain Library
This tutorial walks through the process of setting up a forward model and simulating a lead field matrix using the MNE-Python library, a foundational step for source estimation tasks in CaliBrain.
CaliBrain Library
Learn how to generate realistic, multi-trial brain source signals with event-related potential (ERP) characteristics. This is crucial for testing the performance of source reconstruction algorithms in a controlled environment.
CaliBrain Library
This guide covers the application of various inverse methods available in CaliBrain to reconstruct brain source activity from simulated M/EEG data. Compare different algorithms and understand their outputs.
CaliBrain Library
A key feature of CaliBrain is uncertainty quantification. This tutorial demonstrates how to visualize the uncertainty of source estimates by plotting credible intervals and assess model calibration with calibration curves.
MNE-Python Toolbox
This example demonstrates the distinct forms of information captured by coherency-based connectivity methods, and highlights the scenarios in which these different methods should be applied.
MNE-Python Toolbox
This example demonstrates how canonical coherency (CaCoh) - a multivariate method based on coherency - can be used to compute connectivity between whole sets of sensors, alongside spatial patterns of the connectivity.